%% This BibTeX bibliography file was created using BibDesk.
%% http://bibdesk.sourceforge.net/


%% Created for Fabien Campillo at 2011-12-09 10:12:53 +0100 


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@PhDThesis{HaidarThesis,
        Author = {Ihab Haidar},
        Title = {Dynamiques microbiennes et modélisation des cycles
		 biogéochimiques terrestres},
        School = {Universit\'{e} Montpellier II},
        Year = {2011},        
        Type={Doctorat en mathématiques et applications des mathématiques}
}
		 
		 
		 

@inproceedings{Sari2011b,
	Author = {Tewfik Sari and Nahla Abdellatif and Boumediene Benyahia and {Lamine Mamadou} Diagne and Miled {El Hajji} and Radhoaune Fekih-Salem},
	Booktitle = {Proceedings of the 5th conference on Trends in Applied Mathematics in Tunisia, Algeria, Morocco -- Sousse, 23-26 Avril 2011, Tunisia},
	x-international-audience={yes}, 
	x-proceedings={yes},
	Date-Added = {2011-12-07 11:18:52 +0100},
	Date-Modified = {2011-12-07 11:19:44 +0100},
	Editor = {M. Hassine and M. Moakher},
	Pages = {19-25},
	Publisher = {Centre de Publication Universitaire},
	Title = {Mod{\'e}lisation math{\'e}matique en biologie : comp{\'e}tition, coexistence et croissance},
	Year = {2011}}

@inproceedings{fekih-salem2011c,
	Author = {Radhoaune Fekih-Salem and Tewfik Sari and Alain Rapaport},
	Booktitle = {Proceedings of the 5th conference on Trends in Applied Mathematics in Tunisia, Algeria, Morocco -- Sousse, 23-26 Avril 2011, Tunisia},
	Date-Added = {2011-12-07 11:18:03 +0100},
	Date-Modified = {2011-12-07 11:18:48 +0100},
	x-international-audience={yes}, 
	x-proceedings={yes},
	Editor = {M. Hassine and M. Moakher},
	Pages = {477-483},
	Publisher = {Centre de Publication Universitaire},
	Title = {La floculation et la coexistence dans le chemostat},
	Year = {2011}}

@inproceedings{el-hajji2011b,
	Author = {Miled {El Hajji} and Tewfik Sari and Jérôme Harmand},
	Booktitle = {Proceedings of the 5th conference on Trends in Applied Mathematics in Tunisia, Algeria, Morocco -- Sousse, 23-26 Avril 2011, Tunisia},
	Date-Added = {2011-12-07 11:17:24 +0100},
	Date-Modified = {2011-12-07 11:17:59 +0100},
	x-international-audience={yes}, 
	x-proceedings={yes},
	Editor = {M. Hassine and M. Moakher},
	Pages = {451-456},
	Publisher = {Centre de Publication Universitaire},
	Title = {Analyse d'un relation syntrophique: cas d'un chemostat},
	Year = {2011}}

@inproceedings{fekih-salem2011b,
	Author = {Radhoaune Fekih-Salem and Nahla Abdellatif and Tewfik Sari and Jérôme Harmand},
	Booktitle = {Proceedings of the 5th conference on Trends in Applied Mathematics in Tunisia, Algeria, Morocco -- Sousse, 23-26 Avril 2011, Tunisia},
	Date-Added = {2011-12-07 11:16:27 +0100},
	Date-Modified = {2011-12-07 11:17:16 +0100},
	x-international-audience={yes}, 
	x-proceedings={yes},
	Editor = {M. Hassine and M. Moakher},
	Pages = {457-463},
	Publisher = {Centre de Publication Universitaire},
	Title = {Sur un mod{\`e}le de digestion anar{\'e}obie avec d{\'e}gradation enzymatique du substrat sous forme solide},
	Year = {2011}}

@inproceedings{benyahia2011a,
	Author = {Boumediene Benyahia and Tewfik Sari and Brahim Cherki and Jérôme Harmand},
	Booktitle = {Proceedings of the 5th conference on Trends in Applied Mathematics in Tunisia, Algeria, Morocco -- Sousse, 23-26 Avril 2011, Tunisia},
	Date-Added = {2011-12-07 11:15:01 +0100},
	Date-Modified = {2011-12-07 11:16:07 +0100},
	x-international-audience={yes}, 
	x-proceedings={yes},
	Editor = {M. Hassine and M. Moakher},
	Pages = {465-470},
	Publisher = {Centre de Publication Universitaire},
	Title = {Mod{\'e}lisation math{\'e}matique d'un bior{\'e}acteur membranaire ana{\'e}robie},
	Year = {2011}}

@article{sari2011a,
	Author = {Tewfik Sari and Frédéric Mazenc},
	Date-Added = {2011-12-07 11:14:03 +0100},
	Date-Modified = {2011-12-07 11:14:47 +0100},
	Journal = {Mathematical Biosciences and Engineering},
	Number = {3},
	Pages = {827-840},
	Title = {Global dynamics of the chemostat with different removal rates and variable yields},
	X-Editorial-Board = {yes},
	X-International-Audience = {yes},
	Volume = {8},
	Year = {2011}}

@article{fekih-salem2011a,
	Author = {Radhoaune Fekih-Salem and Tewfik Sari and Nahla Abdellatif},
	Date-Added = {2011-12-07 11:13:23 +0100},
	Date-Modified = {2011-12-07 11:13:56 +0100},
	X-Editorial-Board = {yes},
	X-International-Audience = {yes},
	Journal = {ARIMA},
	Pages = {15-30},
	Title = {Sur un mod{\`e}le de comp{\'e}tition et de coexistence dans le ch{\'e}mostat},
	Volume = {14},
	Year = {2011}}

@article{rouyer2011a,
	Author = {Jo{\"e}l Rouyer and Tewfik Sari},
	Date-Added = {2011-12-07 11:12:09 +0100},
	Date-Modified = {2011-12-07 11:13:05 +0100},
	X-Editorial-Board = {yes},
	X-International-Audience = {yes},
	Journal = {Advances in Geometry},
	Note = {published online},
	Title = {As many antipodes as vertices on some convex polyhedra},
	Year = {2011}}

@article{campillo2011h,
	Author = {Fabien Campillo and Claude Lobry},
	Date-Added = {2011-11-30 14:04:08 +0100},
	Date-Modified = {2011-11-30 15:27:51 +0100},
	Journal = {ArXiv Mathematics e-prints},
	Number = {arXiv:1111.6460v1},
	X-Editorial-Board = {no},
	X-International-Audience = {yes},
	Title = {Effect of population size in a Prey-Predator model},
	Year = {2011}}

@article{campillo2011chemostat,
	Author = {Fabien Campillo and Marc Joannides and Ir{\`e}ne Larramendy-Valverde},
	Date-Added = {2011-11-28 12:08:24 +0100},
	Date-Modified = {2011-11-28 12:08:24 +0100},
	X-Editorial-Board = {yes},
	X-International-Audience = {yes},
	Journal = {Ecological Modelling},
	Number = {15},
	Pages = {2676-2689},
	Title = {Stochastic modeling of the chemostat},
	Volume = {222},
	Year = {2011}}

@article{campillo2011e,
	Author = {Fabien Campillo and Marc Joannides and Ir{\`e}ne Larramendy-Valverde},
	Date-Added = {2011-11-28 12:07:54 +0100},
	Date-Modified = {2011-11-30 14:30:46 +0100},
	X-Editorial-Board = {no},
	X-International-Audience = {yes},
	Journal = {ArXiv Mathematics e-prints},
	Number = {arXiv:1111.5716v1},
	Title = {Approximation of the {Fokker-Planck} equation of the stochastic chemostat},
	Year = {2011}}

@inproceedings{campillo2011f,
	Author = {Fabien Campillo and Nicolas Champagnat},
	Booktitle = {MAMERN11: 4th International Conference on Approximation Methods and Numerical Modelling in Environment and Natural Resources Saidia (Morocco) May 23-26, 2011},
	Date-Added = {2011-11-28 12:06:20 +0100},
	Date-Modified = {2011-11-28 12:06:20 +0100},
	Title = {An individual-based model for clonal plant dynamics},
	X-International-Audience = {yes},
	X-Proceedings = {yes},
	Year = {2011}}

@inproceedings{campillo2011g,
	Author = {Fabien Campillo and Marc Joannides and Ir{\`e}ne Larramendy-Valverde},
	Booktitle = {MAMERN11: 4th International Conference on Approximation Methods and Numerical Modelling in Environment and Natural Resources Saidia (Morocco)May 23-26, 2011},
	Date-Added = {2011-11-28 12:06:20 +0100},
	Date-Modified = {2011-11-28 12:06:20 +0100},
	Title = {Stochastic models for the chemostat},
	X-International-Audience = {yes},
	X-Proceedings = {yes},
	Year = {2011}}

@inproceedings{BHIRR11,
	Author = {J. Bello Rivas and Jérôme Harmand and B. Ivorra and A. Ramos del Omo and Alain Rapaport},
	Booktitle = {STIC \&\ Environnement, Saint-Etienne (France)},
	Date-Added = {2011-11-28 11:48:04 +0100},
	Date-Modified = {2011-12-09 10:12:45 +0100},
	Month = {mai},
	Title = {Bioreactor shape optimization: modeling, simulation, and shape optimization of a simple bioreactor for water treatment},
	X-Editorial-Board = {yes},
	X-International-Audience = {no},
	X-Pays = {FR},
	X-Proceedings = {yes},
	Year = {2011}}

@unpublished{DEYGOUT:2011:HAL-00604377:1,
	Affiliation = {MODEMIC - INRIA Sophia Antipolis - INRIA - INRA - Math{\'e}matiques, Informatique et STatistique pour l'Environnement et l'Agronomie - MISTEA - INRA - Laboratoire de Physique Th{\'e}orique de la Mati{\`e}re Condens{\'e}e - LPTMC - CNRS : UMR7600 - Universit{\'e} Pierre et Marie Curie - Paris VI - Institut des Hautes Etudes Scientifiques - IHES - IHES},
	Author = {Chlo{\'e} Deygout  and Annick Lesne  and Fabien Campillo and Alain Rapaport},
	Date-Added = {2011-11-28 11:48:04 +0100},
	Date-Modified = {2011-11-28 11:48:04 +0100},
	Hal_Id = {hal-00604377},
	Language = {Anglais},
	Month = Jun,
	Pdf = {http://hal.archives-ouvertes.fr/hal-00604377/PDF/110629\_papier\_DISCO.pdf},
	Title = {{A multiscale approach for biofilm modelling: application for growth in a plug flow reactor}},
	Url = {http://hal.archives-ouvertes.fr/hal-00604377/en/},
	Year = {2011},
	Bdsk-Url-1 = {http://hal.archives-ouvertes.fr/hal-00604377/en/}}

@unpublished{FEKIHSALEM:2011:HAL-00604633:2,
	Affiliation = {MODEMIC - INRIA Sophia Antipolis - INRIA - INRA - Math{\'e}matiques, Informatique et STatistique pour l'Environnement et l'Agronomie - MISTEA - INRA - Laboratoire de Math{\'e}matiques Informatique et Applications - LMIA - Universit{\'e} de Haute Alsace - Mulhouse - Biotechnologie de l'Environnement - LBE - INRA : UR0050},
	Author = {Radhoaune Fekih-Salem and Alain Rapaport and Tewfik Sari and Claude Lobry and Jérôme Harmand},
	Date-Added = {2011-11-28 11:48:04 +0100},
	Date-Modified = {2011-11-28 11:48:04 +0100},
	Hal_Id = {hal-00604633},
	Language = {Anglais},
	Month = Sep,
	Pdf = {http://hal.archives-ouvertes.fr/hal-00604633/PDF/hal-RLSH4.pdf},
	Title = {{Extensions of the chemostat model with flocculation}},
	Url = {http://hal.archives-ouvertes.fr/hal-00604633/en/},
	Year = {2011},
	Bdsk-Url-1 = {http://hal.archives-ouvertes.fr/hal-00604633/en/}}

@unpublished{GAJARDO:2011:HAL-00521118:2,
	Affiliation = {Universidad T{\'e}cnica Federico Santa Mar{\'\i}a - Universidad T{\'e}cnica Federico Santa Mar{\'\i}a (UTFSM) - Math{\'e}matiques, Informatique et STatistique pour l'Environnement et l'Agronomie - MISTEA - INRA - Laboratoire de biotechnologie de l'environnement - Lbe - INRA : UR050 - Centro de Modelamiento Matem{\'a}tico - CMM - CNRS : UMI2807 - Universidad de Chile},
	Author = {Pedro Gajardo  and Jérôme Harmand and Hector {Ramirez Cabrera}  and Alain Rapaport},
	Collaboration = {{\'e}quipe associ{\'e}e INRIA avec le Chili 'DYMECOS'},
	Date-Added = {2011-11-28 11:48:04 +0100},
	Date-Modified = {2011-11-28 11:48:04 +0100},
	Hal_Id = {hal-00521118},
	Language = {Anglais},
	Month = May,
	Pdf = {http://hal.archives-ouvertes.fr/hal-00521118/PDF/halGHRR1.pdf},
	Title = {{Minimal-time bioremediation of natural water resources}},
	Url = {http://hal.archives-ouvertes.fr/hal-00521118/en/},
	Year = {2011},
	Bdsk-Url-1 = {http://hal.archives-ouvertes.fr/hal-00521118/en/}}

@article{GRRH11-automatica,
	Author = {Pedro Gajardo and Hector {Ramirez Cabrera} and Alain Rapaport and Jérôme Harmand},
	Date-Added = {2011-11-28 11:48:04 +0100},
	Date-Modified = {2011-11-29 14:22:10 +0100},
	Journal = {Automatica},
	Number = {8},
	Pages = {1764-1769},
	Title = {Minimal-time bioremediation of natural water resources},
	Volume = {47},
	X-Editorial-Board = {yes},
	X-International-Audience = {yes},
	X-Proceedings = {no},
	Year = {2011}}

@inproceedings{GRRR11,
	Author = {Pedro Gajardo and Hector {Ramirez Cabrera} and Victor  Riqueleme and Alain Rapaport},
	Booktitle = {International Symposium on Mathematical and Computational Biology, Santiago (Chile)},
	Date-Added = {2011-11-28 11:48:04 +0100},
	Date-Modified = {2011-11-28 11:48:04 +0100},
	Month = {november},
	Title = {Bioremediation of natural water resources via optimal control techniques},
	X-Editorial-Board = {yes},
	X-International-Audience = {yes},
	X-Pays = {CL},
	X-Proceedings = {yes},
	Year = {2011}}

@article{HRG11,
    Author = {Ihab Haidar and Alain Rapaport and Frédéric Gérard},		 
	Date-Added = {2011-11-28 11:48:04 +0100},
	Date-Modified = {2011-11-28 11:48:04 +0100},
	Journal = {Mathematical Biosciences and Engineering},
	Number = {4},
	Pages = {953-971},
	Title = {Effects of spatial structure and diffusion on the performances of the chemostat},
	Volume = {8},
	X-Editorial-Board = {yes},
	X-International-Audience = {yes},
	X-Proceedings = {no},
	Year = {2011}}

@article{HRG11bb,
	Author = {Ihab Haidar and Frédéric Gérard and Alain Rapaport},
	Date-Added = {2011-11-28 11:48:04 +0100},
	Date-Modified = {2011-11-28 11:55:30 +0100},
	Journal = {Computational Ecology and Software},
	Number = {4},
	Pages = {224-239},
	Title = {Comparison of numerical simulations of reactive transport and chemostat-like models},
	Volume = {1},
	X-Editorial-Board = {yes},
	X-International-Audience = {yes},
	X-Proceedings = {no},
	Year = {2011}}

@article{JRR11,
	Author = {Mounir Jerry and Nadia Raissi and Alain Rapaport},
	Date-Added = {2011-11-28 11:48:04 +0100},
	Date-Modified = {2011-11-28 11:48:04 +0100},
	Journal = {JP Journal of Applied Mathematics},
	Number = {1},
	Pages = {41-60},
	Title = {Viability analysis for an explicit inshore-offshore model},
	Volume = {1},
	X-Editorial-Board = {yes},
	X-International-Audience = {yes},
	X-Proceedings = {no},
	Year = {2011}}

@article{RD11,
	Author = {Alain Rapaport and Denis Dochain},
	Date-Added = {2011-11-28 11:48:04 +0100},
	Date-Modified = {2011-11-28 11:48:04 +0100},
	Journal = {IEEE Transactions on Automatic Control},
	Number = {11},
	Pages = {2671-2676},
	Title = {Minimal time control of fed-batch processes with growth functions having several maxima},
	Volume = {56},
	X-Editorial-Board = {yes},
	X-International-Audience = {yes},
	X-Proceedings = {no},
	Year = {2011}}

@article{haegeman2011a,
	Author = {Bart Haegeman and Michel Loreau},
	Date-Added = {2011-11-28 11:46:43 +0100},
	Date-Modified = {2011-11-28 11:46:43 +0100},
	Journal = {Journal of Theoretical Biology},
	Pages = {150-165},
	Title = {A mathematical synthesis of niche and neutral theories in community ecology},
	Volume = {269},
	X-Pays = {CA},
  	X-International-Audience = {yes},
  	X-Editorial-Board = {yes},
	Year = {2011}}

@article{haegeman2011b,
	Author = {Bart Haegeman  and Rampal S. Etienne},
	Date-Added = {2011-11-28 11:46:43 +0100},
	Date-Modified = {2011-11-28 11:46:43 +0100},
	Journal = {Oikos},
	Pages = {961-963},
	Title = {Independent species in independent niches behave neutrally},
	Volume = {120},
	X-Pays = {NL},
	X-International-Audience = {yes},
  	X-Editorial-Board = {yes},
	Year = {2011}}

@article{etienne2011,
	Author = {Rampal S. Etienne  and Bart Haegeman},
	Date-Added = {2011-11-28 11:46:43 +0100},
	Date-Modified = {2011-11-28 11:46:43 +0100},
	Journal = {Theoretical Ecology},
	Pages = {87-109},
	Title = {The neutral theory of biodiversity with random fission speciation},
	Volume = {4},
	X-Pays = {NL},
	X-International-Audience = {yes},
  	X-Editorial-Board = {yes},
	Year = {2011}}

@article{kislyuk2011,
	Author = {Andrey Kislyuk and Bart Haegeman and Nicholas Bergman and Joshua Weitz},
	Date-Added = {2011-11-28 11:46:43 +0100},
	Date-Modified = {2011-11-28 11:46:43 +0100},
	Doi = {10.1186/1471-2164-12-32},
	Journal = {BMC Genomics},
	Number = {1},
	Pages = {32},
	Title = {Genomic fluidity: an integrative view of gene diversity within microbial populations},
	Url = {http://www.biomedcentral.com/1471-2164/12/32},
	Volume = {12},
	X-Pays = {US},
	X-International-Audience = {yes},
  	X-Editorial-Board = {yes},
	Year = {2011},
	Bdsk-Url-1 = {http://www.biomedcentral.com/1471-2164/12/32},
	Bdsk-Url-2 = {http://dx.doi.org/10.1186/1471-2164-12-32}}

@article{HRG11b,
	Adsurl = {http://adsabs.harvard.edu/abs/2011arXiv1108.1772H},
	Archiveprefix = {arXiv},
	Author = {Ihab Haidar and Frédéric Gérard and Alain Rapaport},
	Date-Added = {2011-11-16 16:35:36 +0100},
	Date-Modified = {2011-11-28 11:54:06 +0100},
	X-Editorial-Board = {no},
	X-International-Audience = {yes},
	Eprint = {1108.1772},
	Journal = {ArXiv e-prints},
	Keywords = {Mathematics - Dynamical Systems, Physics - Geophysics, Quantitative Biology - Quantitative Methods},
	Month = aug,
	Primaryclass = {math.DS},
	Title = {{Comparison of numerical simulations of reactive transport and chemostat-like models}},
	Year = 2011}

@article{fekihsalem2011a-arxiv,
	Adsurl = {http://adsabs.harvard.edu/abs/2011arXiv1106.6038F},
	Archiveprefix = {arXiv},
	Author = {Radhoaune Fekih-Salem and Alain Rapaport and Tewfik Sari and Claude Lobry and Jérôme Harmand},
	X-Editorial-Board = {no},
	X-International-Audience = {yes},
	Date-Added = {2011-11-16 16:35:36 +0100},
	Date-Modified = {2011-11-28 11:46:02 +0100},
	Eprint = {1106.6038},
	Journal = {ArXiv e-prints},
	Keywords = {Mathematics - Dynamical Systems, Quantitative Biology - Cell Behavior},
	Month = jun,
	Primaryclass = {math.DS},
	Title = {{Extensions of the chemostat model with flocculation}},
	Year = 2011}

@inproceedings{HRG11c,
        Author = {Ihab Haidar and Alain Rapaport and Frédéric Gérard},		 
	Booktitle = {STIC \&\ Environnement, Saint-Etienne (France)},
	Date-Added = {2011-11-16 16:35:36 +0100},
	Date-Modified = {2011-12-09 10:12:50 +0100},
	Month = {mai},
	Title = {Effects of spatial structure and diffusion on the performances of the chemostat},
	X-Editorial-Board = {yes},
	X-International-Audience = {no},
	X-Pays = {FR},
	X-Proceedings = {yes},
	Year = {2011}}

@techreport{campillo2011-inria,
	Author = {Fabien Campillo and Dominique Hervé and Angelo Raherinirina and Rivo Rakotozafy},
	Date-Modified = {2011-11-28 11:45:15 +0100},
	Institution = {INRIA},
	Month = Jul,
	Number = {RR-7670},
	Pages = {21},
	Title = {{A Markov model of land use dynamics}},
	Type = {Research Report},
	Url = {http://hal.inria.fr/inria-00605925/en},
	X-Id-Hal = {inria-00605925},
	X-Pays = {MG},
	Year = {2011},
	Bdsk-Url-1 = {http://hal.inria.fr/inria-00605925/en}}
	
	
	
@inproceedings{CAMPILLO:2011:HAL-00651732:1,
    hal_id = {hal-00651732},
    url = {http://hal.inria.fr/hal-00651732/en/},
    title = {{Monte Carlo simulation and mathematical analysis of an individual-based model for clonal plant dynamics}},
    author = {Campillo, Fabien and Champagnat, Nicolas and Mony, Cendrine},
    language = {Anglais},
    affiliation = {MODEMIC - INRIA Sophia Antipolis , Math{\'e}matiques, Informatique et STatistique pour l'Environnement et l'Agronomie - MISTEA , TOSCA - INRIA Sophia Antipolis / INRIA Lorraine / IECN , Institut Elie Cartan Nancy - IECN , Ecosyst{\`e}mes, biodiversit{\'e}, {\'e}volution - ECOBIO},
    booktitle = {{54th Symposium of the International Association for Vegetation Science (IAVS)}},
    address = {Lyon, France},
	x-international-audience={yes}, 
	x-proceedings={no},
    year = {2011},
    month = Jun,
}
	
	
@inproceedings{CAMPILLO:2011:HAL-00651758:1,
    hal_id = {hal-00651758},
    url = {http://hal.inria.fr/hal-00651758/en/},
    title = {{Simulation and Analysis of a {Markovian} Individual-Based Model for Clonal Plant Dynamics}},
    author = {Campillo, Fabien and Champagnat, Nicolas},
    language = {Anglais},
    affiliation = {MODEMIC - INRIA Sophia Antipolis , Math{\'e}matiques, Informatique et STatistique pour l'Environnement et l'Agronomie - MISTEA , TOSCA - INRIA Sophia Antipolis / INRIA Lorraine / IECN , Institut Elie Cartan Nancy - IECN},
    booktitle = {{7th International Congress on Industrial and Applied Mathematics}},
    address = {Vancouver, Canada},
	X-International-Audience = {yes},
	X-Proceedings = {no},
    year = {2011},
    month = Jul,
}


@inproceedings{CAMPILLO:2011:HAL-00651777:1,
    hal_id = {hal-00651777},
    url = {http://hal.inria.fr/hal-00651777/en/},
    title = {{Stochastic Models for the Chemostat}},
    author = {Campillo, Fabien and Joannides, Marc and Larramendy, Ir{\`e}ne},
    language = {Anglais},
    affiliation = {MODEMIC - INRIA Sophia Antipolis , Math{\'e}matiques, Informatique et STatistique pour l'Environnement et l'Agronomie - MISTEA , Institut de Math{\'e}matiques et de Mod{\'e}lisation de Montpellier - I3M},
    booktitle = {{7th International Congress on Industrial and Applied Mathematics}},
    address = {Vancouver, Canada},
	X-International-Audience = {yes},
	X-Proceedings = {no},
    year = {2011},
    month = Jul,
}

	
